Mongo Oligo Mass Calculator v2.08
This program returns, from a given sequence of nucleic acids, the theoretical monoisotopic and average masses with different adducts, the list of CID fragments including base loss (a-B, w, y and d-H2O) and internal fragments, and products of digestion by specific enzymes. In addition, a list of known RNA modifications database is available with a user defined nucleic acid for any other modification
Oligo Composition Calculator
OMA & OPA
Peptides and Proteins
Proteomics tools for mining sequence databases in conjunction with Mass Spectrometry experiments
ProSight Lite is a free Windows application for matching a single candidate protein sequence and its modifications against a set of mass spectrometric observations.
A Software Suite for Activated Ion Mobility Mass Spectrometry Applied To Multimeric Protein Assemblies. ORIGAMI is a two component software suite for faster acquisition of actived ion mobility mass spectrometry (IM-MS) datasets and analysis of MS and IM-MS data
Provides a way of differentianting proteins of similar structure as well as measure the stability of proteins. CIU has been used for a variety of applications such as differentiating binding modes of different ligands, distinguishing isocross-sectional proteins,
An open source data integration framework and a software suite for mass spectrometry based proteomics.
Software to advance your proteoform analysis by allowing robust proteoform interrogation. A matching routine enables customized fitting of ions to their theoretical counterparts. under request
Allows modelling, simulation and analysis of ionized flying species. msXpertSuite provides (1) massXpert with a sub-module for defining new polymer chemistries, a desktop calculator, polymer sequence editor and a chemical center, and a data mining center.